Organise MSc thesis project into one folder

.gitignore

@@ -0,0 +1,38 @@
+# macOS / editors
+.DS_Store
+.obsidian/
+
+# Large or third-party files (kept locally, not in the repo)
+*.mp4
+05-course-materials/
+
+# LaTeX build artifacts
+*.aux
+*.log
+*.out
+*.toc
+*.fls
+*.fdb_latexmk
+*.synctex.gz
+*.bbl
+*.blg
+*.run.xml
+*.bcf
+
+# Personal AI-assisted reference draft — never for submission
+03-cs6513-paper/ref_draft.tex
+03-cs6513-paper/ref_draft.pdf
+
+# Python
+__pycache__/
+*.pyc
+.venv/
+
+# Experiment data, checkpoints and raw outputs (run metadata in runs/ IS tracked)
+06-experiments/data/
+06-experiments/vendor/
+06-experiments/runs/*/ckpt.pt
+06-experiments/runs/*/stdout.log
+
+# Literature-search API cache
+02-literature/search/.cache/